Publications

K. A. Perzel Mandell, N. J. Eagles, R. Wilton, A. J. Price, Stephen A. Semick, L. Collado-Torres, W. S. Ulrich, R. Tao, S. Han, A. S. Szalay, T. M. Hyde, J. E. Kleinman, D. R. Weinberger, A. E. Jaffe (2021). Genome-wide sequencing-based identification of methylation quantitative trait loci and their role in schizophrenia risk. Nature Communications.

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Kaspar Keledjian, Orest Tsymbalyuk, Stephen A. Semick, Mitchell Moyer, Serban Negoita, Kevin Kim, Svetlana Ivanova, Volodymyr Gerzanich, J. Marc Simard (2020). The peroxisome proliferator-activated receptor gamma (PPARγ) agonist, rosiglitazone, ameliorates neurofunctional and neuroinflammatory abnormalities in a rat model of Gulf War Illness. PLOS ONE.

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Syed Hussain Ather, Olaitan Igbagbo Awe, Thomas J. Butler, Tamiru Denka, Stephen A. Semick, Wanhu Tang, Ben Busby (2020). SeqAcademy: an educational pipeline for RNA-Seq and ChIP-Seq analysis. F1000Research.

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Olukayode A. Sosina, Matthew N. Tran, Kristen R. Maynard, Ran Tao, Margaret A. Taub, Keri Martinowich, Stephen A. Semick, Bryan C. Quach, Daniel R. Weinberger, Thomas M. Hyde, Dana B. Hancock, Joel E. Kleinman, Jeffrey T. Leek, Andrew E. Jaffe (2020). Strategies for cellular deconvolution in human brain RNA sequencing data. bioRxiv.

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L. Ma, Stephen A. Semick, Q. Chen, C. Li, R. Tao, A. J. Price, J. H. Shin, Y. Jia, N. J. Brandon, A. J. Cross, T. M. Hyde, J. E. Kleinman, A. E. Jaffe, D. R. Weinberger, R. E. Straub (2020). Schizophrenia risk variants influence multiple classes of transcripts of sorting nexin 19 (SNX19). Molecular Psychiatry.

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C. A. Markunas, Stephen A. Semick, B. C. Quach, R. Tao, A. Deep-Soboslay, M. U. Carnes, L. J. Bierut, T. M. Hyde, J. E. Kleinman, E. O. Johnson, A. E. Jaffe, D. B. Hancock (2020). Genome-wide DNA methylation differences in nucleus accumbens of smokers vs. nonsmokers. Neuropsychopharmacology.

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E. E. Burke, J. G. Chenoweth, J. H. Shin, L. Collado-Torres, S. K. Kim, N. Micali, Y. Wang, C. Colantuoni, R. E. Straub, D. J. Hoeppner, H. Y. Chen, A. Sellers, K. Shibbani, G. R. Hamersky, M. Diaz Bustamante, B. N. Phan, W. S. Ulrich, C. Valencia, A. Jaishankar, A. J. Price, A. Rajpurohit, Stephen A. Semick, R. W. Bürli, J. C. Barrow, D. J. Hiler, S. C. Page, K. Martinowich, T. M. Hyde, J. E. Kleinman, K. F. Berman, J. A. Apud, A. J. Cross, N. J. Brandon, D. R. Weinberger, B. J. Maher, R. D. G. McKay, A. E. Jaffe (2020). Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs. Nature Communications.

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L. Collado-Torres, E. E. Burke, A. Peterson, J. Shin, R. E. Straub, A. Rajpurohit, Stephen A. Semick, W. S. Ulrich, A. J. Price, C. Valencia, R. Tao, A. Deep-Soboslay, T. M. Hyde, J. E. Kleinman, D. R. Weinberger, A. E. Jaffe (2019). Regional Heterogeneity in Gene Expression, Regulation, and Coherence in the Frontal Cortex and Hippocampus across Development and Schizophrenia. Neuron.

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Stephen A. Semick, R. A. Bharadwaj, L. Collado-Torres, R. Tao, J. H. Shin, A. Deep-Soboslay, J. R. Weiss, D. R. Weinberger, T. M. Hyde, J. E. Kleinman, A. E. Jaffe, V. S. Mattay (2019). Integrated DNA methylation and gene expression profiling across multiple brain regions implicate novel genes in Alzheimer's disease. Acta Neuropathologica.

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Stephen A. Semick, L. Collado-Torres, C. A. Markunas, J. H. Shin, A. Deep-Soboslay, R. Tao, M. A. Huestis, L. J. Bierut, B. S. Maher, E. O. Johnson, T. M. Hyde, D. R. Weinberger, D. B. Hancock, J. E. Kleinman, A. E. Jaffe (2018). Developmental effects of maternal smoking during pregnancy on the human frontal cortex transcriptome. Molecular Psychiatry.

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